Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tjap1Tight junction associated protein 1 (peripheral). (537 aa)    
Predicted Functional Partners:
LOC101160233
Tight junction protein 1b; Belongs to the MAGUK family.
     
 0.920
LOC101166369
Tight junction protein 1a; Belongs to the MAGUK family.
     
 0.920
dlg3
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
    
 0.916
LOC101168565
Discs, large homolog 2 (Drosophila); Belongs to the MAGUK family.
    
 0.916
DXO
Decapping exoribonuclease.
      
 0.736
xrn2
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
      
 0.539
slc22a15
Solute carrier family 22 member 15.
      
 0.488
LOC101166648
Amyloid beta (A4) precursor protein-binding, family A, member 1b.
    
   0.466
LOC101168719
Uncharacterized protein.
    
   0.466
apba2
Amyloid beta (A4) precursor protein-binding, family A, member 2b.
    
   0.466
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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