STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKMT2Creatine kinase, mitochondrial 2; Belongs to the ATP:guanido phosphotransferase family. (414 aa)    
Predicted Functional Partners:
gamt
Guanidinoacetate N-methyltransferase; Converts guanidinoacetate to creatine, using S- adenosylmethionine as the methyl donor. Belongs to the class I-like SAM-binding methyltransferase superfamily. RMT2 methyltransferase family.
   
 
 0.930
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.692
LOC101167500
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.588
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 
 0.542
H2LQV6_ORYLA
Uncharacterized protein.
   
 
 0.417
H2MTE5_ORYLA
Myosin, light chain 13.
   
 
 0.417
vdac1
Voltage-dependent anion channel 1.
   
 0.413
H2MFT6_ORYLA
Uncharacterized protein.
   
 
 0.406
LOC101163991
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.401
LOC101171421
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.401
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.