Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101156145Melanin-concentrating hormone receptor 1a. (358 aa)    
Predicted Functional Partners:
LOC101161984
Pro-melanin-concentrating hormone, like.
    
 0.997
LOC101163216
Uncharacterized protein.
    
 0.997
LOC101158034
Melanin-concentrating hormone receptor 2; Belongs to the G-protein coupled receptor 1 family.
   
 
0.930
bbs2
Bardet-Biedl syndrome 2 protein homolog.
     
 0.863
gng2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.849
GNG4
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.849
bbs1
Bardet-Biedl syndrome 1.
     
 0.823
bbs4
Bardet-Biedl syndrome 4.
     
 0.800
bbs7
Bardet-Biedl syndrome 7.
     
 0.792
LOC101168718
Uncharacterized protein.
    
 0.776
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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