Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101167495Un-named hu7910. (689 aa)    
Predicted Functional Partners:
LOC101171376
Asp-B-Hydro_N domain-containing protein.
   
 
 0.970
c1qtnf12
C1q and TNF related 12.
      
 0.602
anln
Anillin, actin binding protein.
    
   0.600
LOC101174346
Si:dkey-30c15.10.
    
   0.600
LOC101154762
Coagulation factor VII, like.
    
 0.580
LOC101155013
Coagulation factor VII.
    
 0.580
LOC101156578
Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.
    
 0.580
nckap5l
NCK-associated protein 5-like.
      
 0.580
LOC111948660
Coagulation factor IXb.
    
 0.580
ENSORLP00000034547
Coagulation factor X.
    
 0.580
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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