STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem174Transmembrane protein 174. (228 aa)    
Predicted Functional Partners:
lrrc31
Leucine rich repeat containing 31.
      
 0.704
LOC101169854
SUZ RNA binding domain containing 1.
      
 0.685
LOC101173759
Metalloendopeptidase.
   
  
 0.681
LOC101160615
Metalloendopeptidase.
   
  
 0.681
cmtm7
CKLF-like MARVEL transmembrane domain containing 7.
    
   0.639
znf366
Zinc finger protein 366.
      
 0.631
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.608
nsa2
NSA2 ribosome biogenesis homolog (S. cerevisiae).
      
 0.597
SZRD1
SUZ RNA binding domain containing 1.
      
 0.509
tmem161a
Transmembrane protein 161A.
      
 0.466
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.