Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ankra2Ankyrin repeat, family A (RFXANK-like), 2. (311 aa)    
Predicted Functional Partners:
rfxap
Regulatory factor X-associated protein.
    
 
 0.881
RFX7
Regulatory factor X7.
    
 
 0.867
rfx5
Regulatory factor X, 5.
    
 
 0.737
LOC101167695
Transmembrane protein 59-like.
    
 0.687
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
      
 0.679
mrps26
Mitochondrial ribosomal protein S26.
   
  
 0.676
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.644
H2LL78_ORYLA
Low density lipoprotein receptor-related protein 2b.
    
 0.635
lrp2
Low density lipoprotein receptor-related protein 2a.
    
 0.635
ENSORLP00000028404
Uncharacterized protein.
    
 0.635
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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