Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
st6galnac3Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (346 aa)    
Predicted Functional Partners:
LOC101164026
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
  
  
0.941
st6galnac2
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
  
  
0.936
st3gal1
Alpha-2,3-sialyltransferase ST3Gal I; Belongs to the glycosyltransferase 29 family.
  
  
0.924
st3gal2
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
  
  
0.923
st8sia5
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.922
st6galnac4
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
  
  
 
0.902
xxylt1
Xyloside xylosyltransferase 1.
      
 0.573
cmip
C-Maf inducing protein.
      
 0.566
st8sia6
Alpha-2,8-sialyltransferase ST8Sia VI; Belongs to the glycosyltransferase 29 family.
  
   
 0.511
LOC101158781
Si:ch1073-513e17.1.
      
 0.508
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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