Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101162581Grancalcin. (239 aa)    
Predicted Functional Partners:
olgc2
Guanylate cyclase.
      
 0.721
npr3
ANF_receptor domain-containing protein.
      
 0.653
olgc6
Guanylate cyclase.
      
 0.651
olgc7
Guanylate cyclase.
      
 0.650
nudcd1
NudC domain containing 1.
    
   0.627
cnp-3
C-type natriuretic peptide 3; Exhibits natriuretic and vasodepressant activity. Has cGMP- stimulating activity. May help to regulate body fluid homeostasis in a variety of aquatic environments.
      
 0.614
ggact
Gamma-glutamylamine cyclotransferase, tandem duplicate 3.
   
  
 0.603
pdcd6ip
Programmed cell death 6 interacting protein.
    
 
 0.520
LOC101174691
Annexin.
   
 
 0.505
etfb
Electron transfer flavoprotein subunit beta.
      
 0.505
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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