STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ovca2OVCA2 serine hydrolase domain containing. (223 aa)    
Predicted Functional Partners:
dph1
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.
 
 
  
 0.707
tyms
Thymidylate synthetase.
     
 0.577
nat9
N-acetyltransferase 9 (GCN5-related, putative).
   
  
 0.572
tmem67
Transmembrane protein 67.
      
 0.559
dazap1
DAZ associated protein 1.
      
 0.523
sox6b
SRY-box containing gene 6b.
      
 0.515
H2L4Z2_ORYLA
Histone H2A; Belongs to the histone H2A family.
      
 0.514
LOC101164761
Rhophilin associated tail protein 1-like.
      
 0.511
LOC101156733
Wee1-like protein kinase.
      
 0.501
hsd17b3
Hydroxysteroid (17-beta) dehydrogenase 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.484
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.