Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
hexbBeta-hexosaminidase. (549 aa)    
Predicted Functional Partners:
hexd
Hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing.
     
 0.947
neu1
Sialidase 1.
  
 0.938
gla
Alpha-galactosidase.
   
 
 0.937
naga
Alpha-galactosidase.
   
 
 0.937
LOC101158601
Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.
    
 0.936
LOC101158848
Chitinase, acidic.1; Belongs to the glycosyl hydrolase 18 family.
    
 0.936
LOC101159095
Chitinase, acidic.3; Belongs to the glycosyl hydrolase 18 family.
    
 0.936
LOC101163739
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.936
glb1
Beta-galactosidase.
  
 
 0.935
LOC101171003
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.926
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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