Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
selenokSelenoprotein K. (83 aa)    
Predicted Functional Partners:
selenof
Selenoprotein F.
   
  
 0.920
selenot
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.914
selenoo
Selenoprotein O1.
      
 0.914
selenon
Selenoprotein N.
      
 0.912
LOC101173635
Selenoprotein M.
      
 0.906
KLHDC2
Kelch domain containing 2.
    
 
 0.886
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
      
 0.839
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.766
LOC101155972
Uncharacterized protein.
   
 0.754
ENSORLP00000039854
Uncharacterized protein.
      
 0.754
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.