STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF207Zinc finger protein 207, b. (470 aa)    
Predicted Functional Partners:
bub3
BUB3 mitotic checkpoint protein.
   
 
 0.948
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
   0.915
sf3a2
Splicing factor 3a, subunit 2.
   
 
 0.813
WDR77
WD repeat domain 77.
   
 
 0.702
srsf10
Serine and arginine rich splicing factor 10.
   
 
 0.671
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
    
 
 0.663
LOC101160375
Uncharacterized protein.
    
 
 0.662
bub1b
BUB1 N-terminal domain-containing protein.
    
 
 0.662
ubr5
Ubiquitin protein ligase E3 component n-recognin 5.
   
 
 0.654
sf3b1
Splicing factor 3b, subunit 1.
   
   0.606
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.