Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rmc1Regulator of MON1-CCZ1. (655 aa)    
Predicted Functional Partners:
mon1a
MON1 secretory trafficking family member A.
    
 0.984
LOC101170997
MON1 secretory trafficking family member Bb.
    
 0.984
LOC110017181
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.970
gripap1
GRIP1 associated protein 1.
    
 
 0.801
rmi1
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
      
 0.754
c9h5orf51
Si:dkey-46a10.3.
      
 0.718
rab7a
Uncharacterized protein.
    
 
 0.695
LOC101157689
RAB7a, member RAS oncogene family.
    
 
 0.695
rmi2
RecQ mediated genome instability 2.
      
 0.650
H2MWH5_ORYLA
Sp6 transcription factor.
    
   0.629
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.