STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158950LIF receptor subunit alpha a. (972 aa)    
Predicted Functional Partners:
clcf1
Cardiotrophin-like cytokine factor 1.
     
 0.922
LOC105357584
Uncharacterized protein.
     
 
0.900
il6st
Uncharacterized protein.
   
0.886
cntfr
Ciliary neurotrophic factor receptor.
    
 0.881
LOC105356917
Uncharacterized protein.
    
0.871
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.832
LOC101167043
Interleukin 12 receptor, beta 2a, like.
    
 
0.821
LOC101163013
Uncharacterized protein.
     
  0.810
LOC101160677
Potassium channel, subfamily V, member 2a; Belongs to the potassium channel family.
      
 0.799
fyb1
Uncharacterized protein.
      
 0.798
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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