STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WHAMMWASP homolog associated with actin, golgi membranes and microtubules. (776 aa)    
Predicted Functional Partners:
was
WASP actin nucleation promoting factor a.
    
 0.950
CDC42
Cell division cycle 42.
    
 0.927
LOC101164400
Uncharacterized protein.
    
 0.927
LOC101164658
Uncharacterized protein.
    
 0.920
LOC101174454
Uncharacterized protein.
    
 0.920
cttn
Cortactin.
   
 0.917
LOC101155648
Hematopoietic cell-specific Lyn substrate 1.
   
 0.917
LOC101168921
Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.
    
  0.906
LOC101169951
Uncharacterized protein.
    
  0.906
LOC101173070
Uncharacterized protein.
    
  0.906
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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