Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169868ELMO domain-containing protein. (726 aa)    
Predicted Functional Partners:
H2LP85_ORYLA
Ras homolog gene family, member Gd.
    
 0.983
LOC101162944
Ras homolog family member Gb.
    
 0.983
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
   
 0.981
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
  
 
 0.943
adgrb1
Adhesion G protein-coupled receptor B1a; Belongs to the G-protein coupled receptor 2 family.
    
 0.938
LOC101171679
Adhesion G protein-coupled receptor B1b; Belongs to the G-protein coupled receptor 2 family.
    
 0.938
LOC101158315
TYRO3 protein tyrosine kinase.
    
 0.911
AXL
AXL receptor tyrosine kinase.
    
 0.909
LOC101173701
Engulfment and cell motility 3.
  
  
 
0.902
LOC101156647
Engulfment and cell motility 2.
  
  
 
0.901
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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