Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rpl35 | gnl2 | ENSORLP00000020671 | ENSORLP00000018355 | Ribosomal protein L35. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.938 |
Rpl35 | gtpbp4 | ENSORLP00000020671 | ENSORLP00000007747 | Ribosomal protein L35. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.903 |
Rpl35 | mrto4 | ENSORLP00000020671 | ENSORLP00000043891 | Ribosomal protein L35. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.995 |
Rpl35 | nsa2 | ENSORLP00000020671 | ENSORLP00000004198 | Ribosomal protein L35. | NSA2 ribosome biogenesis homolog (S. cerevisiae). | 0.994 |
Rpl35 | pes1 | ENSORLP00000020671 | ENSORLP00000031409 | Ribosomal protein L35. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.892 |
Rpl35 | rpl21 | ENSORLP00000020671 | ENSORLP00000042219 | Ribosomal protein L35. | Ribosomal protein L21. | 0.999 |
Rpl35 | rpl23a | ENSORLP00000020671 | ENSORLP00000006953 | Ribosomal protein L35. | Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
Rpl35 | rpl30 | ENSORLP00000020671 | ENSORLP00000016431 | Ribosomal protein L35. | Ribosomal protein L30. | 0.999 |
Rpl35 | rpl31 | ENSORLP00000020671 | ENSORLP00000006524 | Ribosomal protein L35. | Ribosomal protein L31. | 0.999 |
Rpl35 | rsl24d1 | ENSORLP00000020671 | ENSORLP00000006777 | Ribosomal protein L35. | Ribosomal L24 domain containing 1. | 0.989 |
gnl2 | Rpl35 | ENSORLP00000018355 | ENSORLP00000020671 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal protein L35. | 0.938 |
gnl2 | gtpbp4 | ENSORLP00000018355 | ENSORLP00000007747 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
gnl2 | mrto4 | ENSORLP00000018355 | ENSORLP00000043891 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.985 |
gnl2 | nsa2 | ENSORLP00000018355 | ENSORLP00000004198 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | NSA2 ribosome biogenesis homolog (S. cerevisiae). | 0.996 |
gnl2 | pes1 | ENSORLP00000018355 | ENSORLP00000031409 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
gnl2 | rpl21 | ENSORLP00000018355 | ENSORLP00000042219 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal protein L21. | 0.846 |
gnl2 | rpl23a | ENSORLP00000018355 | ENSORLP00000006953 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. | 0.919 |
gnl2 | rpl30 | ENSORLP00000018355 | ENSORLP00000016431 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal protein L30. | 0.885 |
gnl2 | rpl31 | ENSORLP00000018355 | ENSORLP00000006524 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal protein L31. | 0.875 |
gnl2 | rsl24d1 | ENSORLP00000018355 | ENSORLP00000006777 | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | Ribosomal L24 domain containing 1. | 0.996 |
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