Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159264Reprimo-like. (111 aa)    
Predicted Functional Partners:
rprm
Reprimo, TP53 dependent G2 arrest mediator candidate b.
  
  
 
0.903
marveld1
MARVEL domain containing 1.
      
 0.575
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
      
 0.464
telo2
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
      
 0.464
pbrm1
Polybromo 1.
      
 0.463
gas2
Growth arrest-specific 2a.
      
 0.463
LOC101175634
Myocilin.
      
 0.462
MYOC
Myocilin.
      
 0.462
Fezf2
FEZ family zinc finger 2.
      
 0.431
emx2
Empty spiracles homeobox 2.
  
   
 0.415
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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