Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101159117Torsin family 1. (366 aa)    
Predicted Functional Partners:
tor2a
Torsin family 2, member A.
   
   0.884
naglu
N-acetylglucosaminidase, alpha.
   
   0.762
LOC101174989
Uncharacterized protein.
    
 
 0.756
LOC101156078
Uncharacterized protein.
    
 
 0.756
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
     
 0.733
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
 0.733
asns
Asparagine synthetase [glutamine-hydrolyzing].
      
 0.715
c9h9orf78
Zgc:103692.
      
 0.715
cops8
COP9 signalosome subunit 8.
   
 
  0.709
cops2
COP9 signalosome subunit 2.
   
 
  0.708
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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