Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101159745Zgc:91968. (236 aa)    
Predicted Functional Partners:
ints13
Integrator complex subunit 13.
      
 0.535
H2MN31_ORYLA
ATP-binding cassette, sub-family A (ABC1), member 12.
      
 0.528
slc24a5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.528
MOCOS
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
      
 0.519
Ier2
Immediate early response 2b.
      
 0.502
pmel
Premelanosome protein a.
      
 0.494
LOC101162006
PHD-type domain-containing protein.
      
 0.488
rai1
Retinoic acid induced 1.
      
 0.488
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.464
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
      
 0.464
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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