Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
galnt12Polypeptide N-acetylgalactosaminyltransferase. (575 aa)    
Predicted Functional Partners:
c1galt1c1
C1GALT1-specific chaperone 1.
     
 0.830
gcnt1
Uncharacterized protein.
     
 0.812
c1galt1
Si:dkey-202e17.1.
     
 0.732
LOC101170759
Uncharacterized protein.
     
 0.730
LOC101156399
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.730
wdr44
WD repeat domain 44.
      
 0.722
galnt7
Polypeptide N-acetylgalactosaminyltransferase.
   
 0.708
strn4
Striatin, calmodulin binding protein 4.
      
 0.696
LOC101164026
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.691
LOC101170433
Coronin; Belongs to the WD repeat coronin family.
      
 0.619
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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