dcp1a protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

dcp1a

Decapping mRNA 1A. (487 aa)

Predicted Functional Partners:

dcp1b

0.992

xrn1

0.989

edc4

0.979

dcp2

0.964

ENSORLP00000027141

0.955

LOC101167942

0.950

ddx6

0.950

LOC101169936

0.950

LOC101166148

0.950

LOC101174467

0.921

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000027141	LOC101166148	ENSORLP00000027141	ENSORLP00000044438	DCP2 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.888
ENSORLP00000027141	LOC101167942	ENSORLP00000027141	ENSORLP00000018046	DCP2 domain-containing protein.	Uncharacterized protein.	0.888
ENSORLP00000027141	LOC101169936	ENSORLP00000027141	ENSORLP00000040144	DCP2 domain-containing protein.	Enhancer of mRNA decapping 3 homolog (S. cerevisiae).	0.888
ENSORLP00000027141	LOC101174467	ENSORLP00000027141	ENSORLP00000007262	DCP2 domain-containing protein.	PAT1 homolog 2.	0.922
ENSORLP00000027141	dcp1a	ENSORLP00000027141	ENSORLP00000004243	DCP2 domain-containing protein.	Decapping mRNA 1A.	0.955
ENSORLP00000027141	dcp1b	ENSORLP00000027141	ENSORLP00000017547	DCP2 domain-containing protein.	Decapping mRNA 1B.	0.937
ENSORLP00000027141	ddx6	ENSORLP00000027141	ENSORLP00000029180	DCP2 domain-containing protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.888
ENSORLP00000027141	edc4	ENSORLP00000027141	ENSORLP00000016008	DCP2 domain-containing protein.	Enhancer of mRNA decapping 4.	0.965
ENSORLP00000027141	xrn1	ENSORLP00000027141	ENSORLP00000040516	DCP2 domain-containing protein.	5'-3' exoribonuclease 1.	0.946
LOC101166148	ENSORLP00000027141	ENSORLP00000044438	ENSORLP00000027141	Uncharacterized protein; Belongs to the DEAD box helicase family.	DCP2 domain-containing protein.	0.888
LOC101166148	LOC101167942	ENSORLP00000044438	ENSORLP00000018046	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.933
LOC101166148	LOC101169936	ENSORLP00000044438	ENSORLP00000040144	Uncharacterized protein; Belongs to the DEAD box helicase family.	Enhancer of mRNA decapping 3 homolog (S. cerevisiae).	0.933
LOC101166148	LOC101174467	ENSORLP00000044438	ENSORLP00000007262	Uncharacterized protein; Belongs to the DEAD box helicase family.	PAT1 homolog 2.	0.927
LOC101166148	dcp1a	ENSORLP00000044438	ENSORLP00000004243	Uncharacterized protein; Belongs to the DEAD box helicase family.	Decapping mRNA 1A.	0.950
LOC101166148	dcp1b	ENSORLP00000044438	ENSORLP00000017547	Uncharacterized protein; Belongs to the DEAD box helicase family.	Decapping mRNA 1B.	0.949
LOC101166148	dcp2	ENSORLP00000044438	ENSORLP00000023756	Uncharacterized protein; Belongs to the DEAD box helicase family.	Decapping mRNA 2.	0.888
LOC101166148	ddx6	ENSORLP00000044438	ENSORLP00000029180	Uncharacterized protein; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.901
LOC101166148	edc4	ENSORLP00000044438	ENSORLP00000016008	Uncharacterized protein; Belongs to the DEAD box helicase family.	Enhancer of mRNA decapping 4.	0.899
LOC101166148	xrn1	ENSORLP00000044438	ENSORLP00000040516	Uncharacterized protein; Belongs to the DEAD box helicase family.	5'-3' exoribonuclease 1.	0.633
LOC101167942	ENSORLP00000027141	ENSORLP00000018046	ENSORLP00000027141	Uncharacterized protein.	DCP2 domain-containing protein.	0.888