Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101167568Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B. (552 aa)    
Predicted Functional Partners:
DCAF7
DDB1 and CUL4 associated factor 7.
   
 
 0.899
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.890
RNF169
Ring finger protein 169.
   
 
 0.827
LOC101160197
E1A binding protein p300 a.
   
 0.779
LOC101168870
E1A binding protein p300 b.
   
 0.779
adcy9
CREB binding protein b.
   
 0.759
LOC101163392
CREB binding protein a.
   
 0.759
rad54l2
RAD54 like 2.
    
 
 0.746
LOC101167365
Uncharacterized protein.
    
 
 0.746
LOC101162607
Leucine zipper, putative tumor suppressor family member 3b.
    
   0.730
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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