Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101156344 | LOC101167890 | ENSORLP00000004918 | ENSORLP00000004266 | Beta 3-glucosyltransferase a. | Beta 3-glucosyltransferase b. | 0.902 |
LOC101156344 | medag | ENSORLP00000004918 | ENSORLP00000004247 | Beta 3-glucosyltransferase a. | Uncharacterized protein. | 0.400 |
LOC101167890 | LOC101156344 | ENSORLP00000004266 | ENSORLP00000004918 | Beta 3-glucosyltransferase b. | Beta 3-glucosyltransferase a. | 0.902 |
LOC101167890 | medag | ENSORLP00000004266 | ENSORLP00000004247 | Beta 3-glucosyltransferase b. | Uncharacterized protein. | 0.400 |
LOC101170103 | TRAPPC5 | ENSORLP00000002441 | ENSORLP00000028987 | Caudal type homeobox 4. | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.518 |
LOC101170103 | medag | ENSORLP00000002441 | ENSORLP00000004247 | Caudal type homeobox 4. | Uncharacterized protein. | 0.497 |
TRAPPC5 | LOC101170103 | ENSORLP00000028987 | ENSORLP00000002441 | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | Caudal type homeobox 4. | 0.518 |
TRAPPC5 | medag | ENSORLP00000028987 | ENSORLP00000004247 | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | Uncharacterized protein. | 0.487 |
medag | LOC101156344 | ENSORLP00000004247 | ENSORLP00000004918 | Uncharacterized protein. | Beta 3-glucosyltransferase a. | 0.400 |
medag | LOC101167890 | ENSORLP00000004247 | ENSORLP00000004266 | Uncharacterized protein. | Beta 3-glucosyltransferase b. | 0.400 |
medag | LOC101170103 | ENSORLP00000004247 | ENSORLP00000002441 | Uncharacterized protein. | Caudal type homeobox 4. | 0.497 |
medag | TRAPPC5 | ENSORLP00000004247 | ENSORLP00000028987 | Uncharacterized protein. | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.487 |