Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162817AAA domain-containing protein. (765 aa)    
Predicted Functional Partners:
ist1
IST1 factor associated with ESCRT-III.
    
 0.841
ubxn7
UBX domain protein 7.
   
 0.813
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.745
c4h1orf112
Si:dkey-97o5.1.
   
 0.681
KCNH7
Potassium voltage-gated channel subfamily H member 7.
      
 0.652
LOC101169590
Potassium channel, voltage gated eag related subfamily H, member 7.
      
 0.652
Wdr90
WD_REPEATS_REGION domain-containing protein.
    
 0.649
ENSORLP00000042816
Uncharacterized protein.
    
 0.649
ccdc65
NYD-SP28 domain-containing protein.
   
 
 0.612
znf703
Zinc finger protein 703.
      
 0.610
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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