STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stard3StAR-related lipid transfer (START) domain containing 3. (453 aa)    
Predicted Functional Partners:
mospd2
Motile sperm domain containing 2.
    
 
 0.894
LOC101174096
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.866
stard3nl
STARD3 N-terminal like.
  
  
0.837
VAPB
VAMP associated protein B and C.
    
 
 0.822
star
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
     
0.821
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.798
LOC101171949
START domain-containing protein.
     
0.745
snx13
Sorting nexin 13.
      
 0.714
pgap3
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
   
  
 0.691
stard7
StAR-related lipid transfer (START) domain containing 7.
      
 0.664
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.