STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlgap5Discs, large (Drosophila) homolog-associated protein 5. (900 aa)    
Predicted Functional Partners:
cep55
Centrosomal protein 55 like.
   
  
 0.968
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.964
cenpf
Centromere protein F.
  
  
 0.957
aspm
Abnormal spindle microtubule assembly.
   
  
 0.955
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.951
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
  
 0.949
melk
Non-specific serine/threonine protein kinase.
   
  
 0.945
pbk
PDZ binding kinase.
   
  
 0.942
ttk
Ttk protein kinase.
   
  
 0.939
cdca8
Cell division cycle associated 8.
   
  
 0.932
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.