STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (219 aa)    
Predicted Functional Partners:
LOC101175126
Exportin 1 (CRM1 homolog, yeast) a.
   
 0.989
LOC101170539
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.989
rcc1
Regulator of chromosome condensation 1.
   
 0.970
ranbp1
RAN binding protein 1.
   
 0.964
kpnb1
Karyopherin (importin) beta 1.
   
 0.952
LOC101160693
Ran GTPase activating protein 1b.
   
 0.914
rangap1
RAN GTPase activating protein 1a.
   
 0.914
LOC101160447
RAN binding protein 2.
   
 0.911
xpo5
Exportin 5.
   
 0.911
nutf2
Nuclear transport factor 2.
   
 
 0.888
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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