Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101163554ATP-binding cassette, sub-family B (MDR/TAP), member 11b. (1363 aa)    
Predicted Functional Partners:
abcb11
ATP-binding cassette, sub-family B (MDR/TAP), member 11a.
  
  
0.902
LOC101160349
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
   
  
 0.664
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
 0.651
nxph2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.558
LOC101162080
Uncharacterized protein.
  
 0.533
vps33b
VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.511
LOC101161040
Fructose-1,6-bisphosphatase 1a; Belongs to the FBPase class 1 family.
  
  
 0.510
vps53
VPS53 subunit of GARP complex.
      
 0.508
LOC101156992
Fructose-bisphosphatase 1; Belongs to the FBPase class 1 family.
  
  
 0.507
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.506
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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