STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EML4EMAP like 4. (989 aa)    
Predicted Functional Partners:
ENSORLP00000037007
Tyrosine-protein kinase receptor.
   
 0.736
mad2l1
HORMA domain-containing protein.
   
 0.723
LOC101160447
RAN binding protein 2.
   
 0.717
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.689
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.677
bub3
BUB3 mitotic checkpoint protein.
   
 0.676
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.663
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.655
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.644
LOC101159038
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.642
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.