STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167819SAC1 like phosphatidylinositide phosphatase b. (586 aa)    
Predicted Functional Partners:
inpp5b
Inositol polyphosphate-5-phosphatase B.
 
  
 0.992
ocrl
OCRL inositol polyphosphate-5-phosphatase.
 
  
 0.986
ENSORLP00000027534
Uncharacterized protein.
    
 0.942
ENSORLP00000039425
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.942
synj1
Synaptojanin 1.
    
0.935
pi4kb
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.933
LOC101161567
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 0.933
pikfyve
Phosphoinositide kinase, FYVE finger containing.
    
 0.930
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.929
pi4k2a
Phosphatidylinositol 4-kinase type 2 alpha.
     
 0.925
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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