STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp26b1Cytochrome P450 26B1; Belongs to the cytochrome P450 family. (512 aa)    
Predicted Functional Partners:
aldh1a2
Retinaldehyde dehydrogenase type2; Belongs to the aldehyde dehydrogenase family.
   
 0.975
LOC101155293
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.935
LOC101155538
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.935
cyp3a
Uncharacterized protein.
  
0.934
cyp3a40
Cytochrome P450 3A40.
  
0.934
aox1
Aldehyde oxidase beta.
   
 
 0.922
LOC101163759
Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.915
cyp26a1
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
  
  
0.908
LOC101173499
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
  
 0.787
dhrs3
Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.739
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.