Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163669Src like adaptor 1a. (280 aa)    
Predicted Functional Partners:
LOC101163910
Fork-head domain-containing protein.
    
 0.723
wdyhv1
WDYHV motif containing 1.
      
 0.704
abitram
Actin binding transcription modulator.
   
  
 0.704
st6galnac6
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.589
hcrtr2
Hypocretin (orexin) receptor 2.
    
 0.500
agt
Angiotensinogen; Belongs to the serpin family.
     
 0.474
GID4
GID complex subunit 4 homolog.
      
 0.463
GID4-2
GID complex subunit 4 homolog.
      
 0.463
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.457
fau
40S ribosomal protein S30.
    
  0.450
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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