Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
LOC100125502Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (319 aa)    
Predicted Functional Partners:
dhrs7c
Dehydrogenase/reductase (SDR family) member 7Cb.
  
 
 0.516
LOC101160164
Dehydrogenase/reductase (SDR family) member 7Ca.
  
 
 0.506
LOC101160831
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.461
rdh10
Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.461
LOC101162482
Uncharacterized protein.
      
 0.458
LOC111946292
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.454
oxct1
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
     
 0.448
Mdh2
Malate dehydrogenase.
   
 
 0.447
LOC101169963
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.435
hpgd
15-hydroxyprostaglandin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.420
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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