STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A20Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (597 aa)    
Predicted Functional Partners:
cltrn
Si:dkey-194e6.1.
   
 
 0.945
lztfl1
Leucine zipper transcription factor-like 1.
      
 0.764
LOC111946416
Angiotensin-converting enzyme.
   
 
 0.751
ace
Angiotensin-converting enzyme.
   
 
 0.751
fyco1
FYVE and coiled-coil domain containing 1a.
      
 0.694
ugt8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
      
 0.621
kcnk18
Potassium channel, subfamily K, member 18; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.608
LOC101174207
Aryl hydrocarbon receptor interacting protein-like 1.
      
 0.600
LOC101174111
Solute carrier family 36 member 1.
   
  
 0.592
znf185
LIM zinc-binding domain-containing protein.
      
 0.574
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.