Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tcaimT cell activation inhibitor, mitochondrial. (487 aa)    
Predicted Functional Partners:
pth2
Uncharacterized protein.
      
 0.846
mrps36
Mitochondrial ribosomal protein S36.
    
   0.759
lrrc40
Leucine rich repeat containing 40.
   
  
 0.717
bend7
Si:ch211-220f12.4.
      
 0.715
naif1
Nuclear apoptosis inducing factor 1.
      
 0.709
LOC101175311
Si:ch73-389b16.2.
      
 0.709
mocs1
Molybdenum cofactor synthesis 1.
      
 0.692
aamdc
Adipogenesis associated, Mth938 domain containing.
      
 0.625
LOC101170629
Nucleic acid binding protein 1a.
      
 0.609
LOC101160253
Oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide).
    
   0.608
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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