STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnah5Dynein, axonemal, heavy chain 5. (4159 aa)    
Predicted Functional Partners:
dnai2
Dynein axonemal intermediate chain 2a.
  
 0.972
ENSORLP00000042788
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 0.890
Dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.818
dnai2b
WD_REPEATS_REGION domain-containing protein.
  
 0.783
WDR63
WD repeat domain 63.
  
 0.779
wdr78
WD repeat domain 78.
   
 0.779
ccdc103
Dynein_attach_N domain-containing protein.
     
 0.733
LOC101160807
WD_REPEATS_REGION domain-containing protein.
   
 0.732
dctn2
Dynactin 2 (p50).
    
 0.687
LOC101158788
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
   
 0.686
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.