STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsd17b4Hydroxysteroid (17-beta) dehydrogenase 4. (736 aa)    
Predicted Functional Partners:
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.974
acaa1
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.965
LOC101168603
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.955
LOC101161122
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.955
LOC101168027
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.955
LOC101174354
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.955
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
0.947
LOC101173617
Malate synthase-like.
  
  
 0.879
hadhb
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.787
ech1
Enoyl CoA hydratase 1, peroxisomal; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.751
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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