STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hsd17b4Hydroxysteroid (17-beta) dehydrogenase 4. (736 aa)    
Predicted Functional Partners:
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.984
acaa1
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.965
LOC101168603
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.960
LOC101161122
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.960
LOC101168027
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.960
LOC101174354
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.960
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
0.953
eci2
Enoyl-CoA delta isomerase 2.
  
 0.841
LOC101173617
Malate synthase-like.
  
  
 0.795
hadhb
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.783
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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