Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CENPSCentromere protein S. (117 aa)    
Predicted Functional Partners:
cenpx
Uncharacterized protein.
    
 0.996
fancm
Uncharacterized protein.
   
 0.995
faap24
FA core complex associated protein 24.
    
 0.979
fancl
FA complementation group L.
    
 0.978
fancg
Uncharacterized protein.
    
 0.975
fancf
FA complementation group F.
    
 0.971
fancb
FA complementation group B.
    
 0.970
fancc
FA complementation group C.
    
 0.970
LOC101172571
FA complementation group D2.
     
 0.962
faap100
Si:dkey-57h18.1.
    
 0.950
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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