Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttll11Tubulin tyrosine ligase-like family, member 11. (718 aa)    
Predicted Functional Partners:
fbxw2
F-box and WD repeat domain containing 2.
      
 0.886
psmd5
Proteasome 26S subunit, non-ATPase 5.
      
 0.794
Ttll5
Uncharacterized protein.
   
  
 0.756
poc5
POC5 centriolar protein homolog (Chlamydomonas).
      
 0.753
LOC101167092
Uncharacterized protein.
      
 0.724
LOC101162540
RAB14, member RAS oncogene family.
      
 0.708
LOC101175325
Uncharacterized protein.
      
 0.707
armc9
Armadillo repeat containing 9.
      
 0.706
dab2ip
DAB2 interacting protein b.
      
 0.681
LOC101156944
RAS protein activator like 3.
      
 0.665
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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