STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170702AB hydrolase-1 domain-containing protein. (370 aa)    
Predicted Functional Partners:
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.617
palb2
PALB2_WD40 domain-containing protein.
  
 0.617
LOC101160745
Lipase, hormone-sensitive a.
    
 0.611
lipe
Lipase, hormone-sensitive b.
    
 0.609
H2LPC0_ORYLA
Uncharacterized protein.
   
 0.571
LOC101174583
Perilipin; Belongs to the perilipin family.
   
 0.571
plin2
Perilipin; Belongs to the perilipin family.
   
 0.571
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.549
LOC101156893
PNPLA domain-containing protein.
    
 
 0.537
taz
Tafazzin family protein; Belongs to the taffazin family.
    
 
 0.473
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.