STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160196Ephrin-B3a; Belongs to the ephrin family. (340 aa)    
Predicted Functional Partners:
LOC101173092
EPH receptor B1.
   
 0.843
LOC101160423
Ephrin-A3a; Belongs to the ephrin family.
     
 0.783
EFNA5
Ephrin A5; Belongs to the ephrin family.
     
 0.770
LOC101174773
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
     
 0.767
epha4
Eph receptor A4, like.
   
 0.766
ephb4
Eph receptor B4a.
   
 0.766
LOC101156311
Eph receptor B2a.
   
 0.744
LOC101165974
Eph receptor B2b.
   
 0.704
nck1
Cytoplasmic protein.
    
 0.702
LOC101155840
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
     
0.700
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.