Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ankrd1Ankyrin repeat domain 1a (cardiac muscle). (307 aa)    
Predicted Functional Partners:
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
 
 0.659
acaa2
Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.
    
 
 0.610
LOC101165521
Myozenin 2a.
   
 
 0.610
cops2
COP9 signalosome subunit 2.
    
 0.596
asb12
Ankyrin repeat and SOCS box-containing 12b.
  
 
  0.587
LOC101159505
Titin-cap (telethonin).
    
 
 0.558
LOC101170393
Myozenin 2b.
   
 
 0.557
LOC101158682
Lysyl oxidase-like 1.
   
 0.552
ENSORLP00000028016
ANK_REP_REGION domain-containing protein.
  
 
  0.551
Asb14
Ankyrin repeat and SOCS box containing 14a.
  
    0.524
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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