Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101164398PRELI/MSF1 domain-containing protein. (193 aa)    
Predicted Functional Partners:
triap1
TP53 regulated inhibitor of apoptosis 1.
    
 0.909
mfsd2a
Major facilitator superfamily domain containing 2ab.
      
 0.780
nedd9
Neural precursor cell expressed, developmentally down-regulated 9.
      
 0.780
LOC101174272-2
PRELI domain containing 1a.
    
 0.760
LOC101164954
PRELI/MSF1 domain-containing protein.
    
 0.760
fam234b
Family with sequence similarity 234 member B.
      
 0.721
LOC101157687
Actin binding Rho activating protein a.
      
 0.699
H2LA25_ORYLA
PRELI domain containing 1b.
    
 0.695
LOC101171109
Hemojuvelin BMP co-receptor.
      
 0.693
LOC101165831
4-hydroxyphenylpyruvate dioxygenase.
      
 0.658
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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