STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl3Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (362 aa)    
Predicted Functional Partners:
mrpl4
Mitochondrial ribosomal protein L4.
  
 0.995
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
 
 0.995
mrpl12
Mitochondrial ribosomal protein L12.
  
 0.995
MRPL21
Mitochondrial ribosomal protein L21.
   
 0.992
mrpl9
Mitochondrial ribosomal protein L9.
  
 0.991
mrpl19
Mitochondrial ribosomal protein L19.
  
 0.989
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.989
mrpl2
Mitochondrial ribosomal protein L2.
  
 0.988
mrpl47
Mitochondrial ribosomal protein L47.
   
 0.988
mrpl28
Mitochondrial ribosomal protein L28.
   
 0.987
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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