STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF1Ras association domain family member 1. (364 aa)    
Predicted Functional Partners:
LOC101167464
Death-domain associated protein.
    
 
 0.897
sav1
Salvador family WW domain containing protein 1.
    
 
 0.891
rassf5
Ras association domain family member 5.
    
 
 0.859
LOC101175466
Uncharacterized protein.
    
 0.781
LOC101155570
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.781
nprl2
NPR2 like, GATOR1 complex subunit.
      
 0.690
mdm2
MDM2 proto-oncogene.
   
 
 0.677
cnksr1
Connector enhancer of kinase suppressor of Ras 1.
    
 
 0.663
rasl11b
RAS-like, family 11, member B.
    
 
 0.652
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 
 0.645
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.