Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101160002Crystallin, beta A1, like 2; Belongs to the beta/gamma-crystallin family. (208 aa)    
Predicted Functional Partners:
tmem33
Transmembrane protein 33.
      
 0.598
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
      
 0.550
SCYL1
SCY1 like pseudokinase 1.
      
 0.526
ENSORLP00000032992
Ig-like domain-containing protein.
      
 0.517
LOC101157526
Lens intrinsic membrane protein 2.2.
      
 0.485
LOC101156476
Annexin.
      
 0.441
anxa10
Annexin.
      
 0.441
LOC101170109
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.425
brinp2
Bone morphogenetic protein/retinoic acid inducible neural-specific 2.
  
     0.406
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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