Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
stk16Serine/threonine kinase 16. (347 aa)    
Predicted Functional Partners:
fastkd3
FAST kinase domains 3.
    
   0.767
pepd
Peptidase D.
    
   0.767
kctd14
Potassium channel tetramerization domain containing 14.
   
   0.719
miip
Migration and invasion inhibitory protein.
    
   0.709
faah2
Fatty acid amide hydrolase 2b.
    
   0.642
faah
Fatty acid amide hydrolase.
    
   0.642
LOC101173816
Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
 
    
 0.620
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
    
   0.615
sf3b3
Splicing factor 3b, subunit 3.
      
 0.605
denr
Density-regulated protein; Belongs to the DENR family.
      
 0.582
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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