Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161894Lipoxygenase homology domains 1b. (1853 aa)    
Predicted Functional Partners:
ENSORLP00000030373
Ring finger protein 213b.
    
 0.716
adgrv1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.663
LOC101161644
Ring finger protein 165b.
    
 
 0.612
slc26a5
Solute carrier family 26 member 5.
   
 
 0.582
TATDN3
TatD DNase domain containing 3.
      
 0.553
kncn
Kinocilin.
      
 0.535
agtpbp1
ATP/GTP binding protein 1.
     
 0.527
aspm
Abnormal spindle microtubule assembly.
      
 0.512
sqle
Squalene epoxidase a.
      
 0.505
H2M7E1_ORYLA
Uncharacterized protein.
    
 0.503
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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