STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155005G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (401 aa)    
Predicted Functional Partners:
sos2
Son of sevenless homolog 2 (Drosophila).
      
 0.601
LOC101169809
Si:dkey-26c10.5.
    
 0.553
LOC105355978
C-type lectin domain-containing protein.
    
 0.553
LOC101155107
Uncharacterized protein.
     
 0.510
NTN4
Netrin 4.
     
 0.510
LOC100125525
Uncharacterized protein.
      
 0.472
pdgfrb
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 
 0.443
arid5b
AT-rich interaction domain 5B.
      
 0.440
LOC101168199
WD_REPEATS_REGION domain-containing protein.
    
  0.403
LOC101175500
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.403
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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